I'm guessing you are not seeing all the windows hidden folders.
The various windows folders that are normally hidden might make up part of that. For example, mine shows 12 GB used on the C: drive in My Computer, and about 8 GB used in the visible folders on the C: drive. Then, there's about 4GB in the hidden Windows folders. I bet you will see the bulk of your space, if you boot to OS X, open the Windows hard drive, and Get Info on all the folders that you see there. When booted to OS X, I see 11 folders and files on the Windows drive, that are not visible when booted to Windows....




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