1 word - Defragment.
Run your permissions repair and make sure your daily, weekly and monthly cron scripts get run once in a while. thats' good.
But you still need a good defragment once in a while, to make order from the chaos on your drive. Disc warrior has a defragmenter with it (if you buy the CD). Norton's Speed disk is another option (as long as it doesn't ask you to run disc doctor, which seems to find more issues than it fixes - even if they aren't there to begin with).
Run your permissions repair and make sure your daily, weekly and monthly cron scripts get run once in a while. thats' good.
But you still need a good defragment once in a while, to make order from the chaos on your drive. Disc warrior has a defragmenter with it (if you buy the CD). Norton's Speed disk is another option (as long as it doesn't ask you to run disc doctor, which seems to find more issues than it fixes - even if they aren't there to begin with).