Keep in mind that you are using two desktop drives that will not be able to be seated inside of the computer. By doing that you can kill the system's air flow and in the mini air flow is tops. So you may end up killing your system doing that.
Just keep in mind as to the pit falls you might find and keep a eye on the temp inside your mac if and when you do that mod.[/QUOTE]
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I thought I'd update and correct this. The Intel (and PPC of course) Mini's airflow is extremely POOR. Temperatures are unnecessarily high as evidenced as what happens when you pop the top off and aren't running things all crammed together in that tiny enclosure. A 2" fan has very limited cooling abilities. Plus its very noisey. Just a very bad design for both heat and noise. But that's ok! Because you can run it without the top, using a full size, full speed 7200 rpm Sata drive (500 gb is around $100 now!) and enjoy superb cooling, especially when you get rid of that toy fan Apple uses. For serious cooling one might replace the heatsink with a heatpipe one designed for high end video cards. They are about $20 on Ebay - cheap!
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Here's my post on temperatures. Compare it with normal temps off the Mini. They are not even close.
http://macosx.com/forums/mac-os-x-s...7255-intel-mini-temperatures.html#post1426007
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Here's some pictures:
http://www.flickr.com/photos/9433215@N03/
The neat thing is that the large fan cools the hard drive very well. Right now, with a low ambient temperature in the room the readings are frigid! Using Temperature Monitor.
First temp is celsius, second is farenheit.
CPU A heatsink 15/59
CPU A Temperature Diode 22/71
CPU Core 1 9/48
Northbridge Position 1 18/64
Northbridge Position 2 19/66
Hard drive 17/62
Without the fan on the hard drive (on the bottom of course as most heat comes off the bottom) the temperatures were about 15-20 more F. Actually the fan is just blowing on it from the side a bit.
Another thing to think about with the Mini: the bottom is composed of a heatpad to conduct heat away from the video chipset on the underside of the motherboard. Never place your Mini on a warm or insulated surface. Ideally a slam of aluminum would suffice. Actually, ideally scrap that lousy case bottom and put a heatsink on the chipset itself. Cool at source.